CDS

Accession Number TCMCG016C28258
gbkey CDS
Protein Id OMO51213.1
Location complement(join(10412..10546,11417..11659,11764..11868,12089..12223,12309..12488,12658..12789,13136..13312,13718..13903,13996..14128,14376..14716,15192..15305))
Organism Corchorus capsularis
locus_tag CCACVL1_29931

Protein

Length 626aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015909.1
Definition Leo1-like protein [Corchorus capsularis]
Locus_tag CCACVL1_29931

EGGNOG-MAPPER Annotation

COG_category J
Description RNA polymerase-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15177        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0000993        [VIEW IN EMBL-EBI]
GO:0001098        [VIEW IN EMBL-EBI]
GO:0001099        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008023        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009910        [VIEW IN EMBL-EBI]
GO:0010048        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016593        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032784        [VIEW IN EMBL-EBI]
GO:0032786        [VIEW IN EMBL-EBI]
GO:0032968        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034243        [VIEW IN EMBL-EBI]
GO:0043175        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045309        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050815        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051219        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070063        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0099122        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:1990269        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000242        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGGAGGAGAAGAGGCACCAGATGATGCAAAACCTCTTCGGTGATCAATCGGAGGAAGAGGAAGAGGTCGATTCCGAACACGAATCCAACCCTCACCCGAATTATGCCTCTGATGAAGCTGAGGGTGCAATGGAGGCTGAAGGAGAAGGTGAAGGTGAAGTGGAGGGGCATGGGGAGGCAGAAGTTGAGAGTGACAGTGACCTACGTGATGTAGAACCTGATCCTGGAGAAAGTGAGGGTGAAAGAGAACAAAGTTCCCAAGAGGTAGATATTGGTGATCAAAGGGAAGAAAGTGAGGCAAAAGATACAGATAGTGATGAAAAAGAAGAATATGGTCAGAGGGTGGTGACAAGCCGGAGGAGGGAAGTAATTGAAAGTGGTTCAGAAAGGTCTGAGGAGAACCATTATCCTGACAATGAAGATGAGGAAGTTGATCAAGCTAGAAGTCCAAGTAAATCACCAGGGGAGAAGGATCAGACGCACCTTTCACAATCAGCTGCTGAAATTCGTGATGTGTTTGGTGATTCTGATGATGAAGAAGCAGCGGAATATGCAGTTCGACATGAAATAGAGCAAGATGAAAATAGATCTCCTTTGGAAGAGGAAGGAAGTTATGGGAAGAGTCCCAGACCTGAAGATATGGTGCATGATGAAGATGCTCATTACGAGTCAGATGATGAGCATATTGAGGTGAAGCAGAAAGAGAAGCCAGTTGGCCCTCCATTGGAGCTAGAAGTTCCACTGCGCCCAGCTCCAGCTGACCCAACCAAGATGAATGTGATCAAAGTTTCTAATATAATGGGCATTGACCCAAAACCATTTGATCCTAAGACATATGTGGAGGAGGATACGTTTGTGACAGATGAGTCTGGATCGCAAAAACGTATACGGTTGGAAAACAATATTGTTCGTTGGAGGTCTGTTAGAAAGAAAGATGGCACAATATCACGTGAAAGCAATGCACGCTTTGTGAGATGGTCAGATGGCAGTTTACAGTTGCTAATTGGCAATGAAGTTCTTGACATATCGGTACAAGAGGCACAGCATGATCAATCACACCTTTTTCTCAGACATGGAAAGGGAATTCTTCAATCTCAGGGAAGAATTTTAAGAAAGATGAGATTTATGCCTTCATCATTGACATCAAATTCCCACAGGCTATTGACTGCTCTTGTTGATTCTCGTCATAAAAAAGTCTATAAGGTTAAGAACTGCGTTACTGACATTGACCCTGAAAGGGAAAAGGAGGAAAAGGAGAAGGCCGAGAATCAAACGATTAGAGCTAACACACTTCTGAATCGTAAGAGAGAAAAGGTGAACCGAAAGTATACACAAAATTCGGATCGAAAGCGTCCGCAACTTTCAACGGGGTATTTGGAGGGTGCTCTTGATGAGGATGATGAAATGGATTATAATGATTCCCGTCGCTCTCGTCGCCGCTTTGACGAAGAACTGGAAGTAGAAGCTCGATCAGAAAAACGCATTATGAATGCCAAGAAGGGTTATAAGGACTTCCCTCGCAAATCATCCTTCTCAAATGTTAAATCATCTCGGCGGCCTATTGATTTCTCTGAAAGTGACAGAGAGGAGTCTGAGTACGAAACTGAAGGGGAGGAAGATGAGGGGTCTCCACACAAAAGGATGGAGGATGAAGAGCCAGAATATGAAGAAGAGGAAGAGGAAGAAGAGCATGATGAAGAGATAGATGCTAATAGAGCCTCGGAGGAGGAAGAGGAAGCTGAGGAACCTAGGAAAAAGGTGAAGCAATCTGTTGGCAGCATTAAGCGCAAGGGAATTGAGTCAGACGAGGATTCACCTCCACGAAAAGCTCCAGCCCATCGTCGCATGGCAGTTGTTTATGATAGTGATGAGGAATGA
Protein:  
MGEEKRHQMMQNLFGDQSEEEEEVDSEHESNPHPNYASDEAEGAMEAEGEGEGEVEGHGEAEVESDSDLRDVEPDPGESEGEREQSSQEVDIGDQREESEAKDTDSDEKEEYGQRVVTSRRREVIESGSERSEENHYPDNEDEEVDQARSPSKSPGEKDQTHLSQSAAEIRDVFGDSDDEEAAEYAVRHEIEQDENRSPLEEEGSYGKSPRPEDMVHDEDAHYESDDEHIEVKQKEKPVGPPLELEVPLRPAPADPTKMNVIKVSNIMGIDPKPFDPKTYVEEDTFVTDESGSQKRIRLENNIVRWRSVRKKDGTISRESNARFVRWSDGSLQLLIGNEVLDISVQEAQHDQSHLFLRHGKGILQSQGRILRKMRFMPSSLTSNSHRLLTALVDSRHKKVYKVKNCVTDIDPEREKEEKEKAENQTIRANTLLNRKREKVNRKYTQNSDRKRPQLSTGYLEGALDEDDEMDYNDSRRSRRRFDEELEVEARSEKRIMNAKKGYKDFPRKSSFSNVKSSRRPIDFSESDREESEYETEGEEDEGSPHKRMEDEEPEYEEEEEEEEHDEEIDANRASEEEEEAEEPRKKVKQSVGSIKRKGIESDEDSPPRKAPAHRRMAVVYDSDEE